Drag and Drop Update
Boy am I glad nobody responded to that last post. Ignore my previous post, apparently I neglected to delete the directory and start over so there were files in the root directory of the project that weren't supposed to be there.
Okay, so I dragged & dropped all the folders and class files from the RunUO 1.0.0 Source in to my project, set unsafe to true for release and debug, and built. Once again, the project builds successfully, generates an .exe the exact same size as the one in RunUO 1.0.0 (non-Source), but when I rename the original Server.exe and replace it with my renamed release it does not bring up the console window but goes straight to a JIT error of Server.Reflection.ReflectionLoadTypeException. The only thing I can think of is the fact that I renamed the executable so I will set my project to compile to Server.exe instead of another name and test.